PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_008541-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 250aa    MW: 27608.4 Da    PI: 7.5987
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_008541-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.3e-052977254
                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   +  + erE+  Rd++N+ f eL   l +a     + + Ka++L  A++ +++L
  NNU_008541-RA 29 KIHKAEREKLKRDHLNELFLELGNALEPA----RQNNGKATVLGDATRILQDL 77
                   567889**********************8....67788999999999888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.56E-42582No hitNo description
Gene3DG3DSA:4.10.280.102.6E-72794IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.6142777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.94E-112792IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MEKEVNPVAE KPVCSSLPNK KSHGKIPKKI HKAEREKLKR DHLNELFLEL GNALEPARQN  60
NGKATVLGDA TRILQDLLAQ VECLKRQNAA LLSESHYVTI EKSELREENS ALEAEIEKLQ  120
SELQERVQCK PAWAAASAPL QNKSSGSHLP EDHHLTLPVL DSTLQPAPVV APVFVIPVHC  180
DLQVYPEPET VQTCKPPSQV SRPHARYPTP SDSWPAQLLA EQSYAAKEGL LSSKNTTVVR  240
GGEQVAGRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010258393.10.0PREDICTED: transcription factor bHLH47-like
RefseqXP_010258394.10.0PREDICTED: transcription factor bHLH47-like
TrEMBLD7SX961e-80D7SX96_VITVI; Putative uncharacterized protein
STRINGVIT_14s0108g00480.t014e-80(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.32e-42bHLH family protein